GT LEGO [GDR BIM] Machine Learning for genomics - Research Day 2023

9:00 - 9:15 (15min)

Introduction

Amphithéâtre Astier, bâtiment Esclangon

Animation LEGO

9:15 - 10:00 (45min)

Keynote: Interpretable models in machine learning and their application in medicine

Amphithéâtre Astier, bâtiment Esclangon

Nataliya Sokolovska

https://lego2023.sciencesconf.org/data/program/abstract_Nataliya.txt

10:00 - 10:30 (30min)

The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Amphithéâtre Astier, bâtiment Esclangon

Javier Mendoza Revilla

https://lego2023.sciencesconf.org/data/program/abstract_Dalla_Torre.txt

10:30 - 11:00 (30min)

Coffee break

11:00 - 11:30 (30min)

Exogenous chromosomes reveal how sequence composition drives chromatin assembly, activity, folding and compartmentalization

Amphithéâtre Astier, bâtiment Esclangon

Julien Mozziconacci

https://lego2023.sciencesconf.org/data/program/abstract_Julien.txt

11:30 - 12:00 (30min)

Probing transcription initiation at microsatellites with fully explainable deep neural networks

Amphithéâtre Astier, bâtiment Esclangon

Charles-Henri Lecellier

https://lego2023.sciencesconf.org/data/program/abstract_Lecellier.txt

12:00 - 13:45 (1h45)

Lunch and Posters

13:45 - 14:30 (45min)

Keynote: Some probabilistic machine learning approaches to dimension reduction with applications to life sciences

Amphithéâtre Astier, bâtiment Esclangon

Julien Chiquet

14:30 - 15:00 (30min)

Model fitness landscapes for genes' interaction pathways

Amphithéâtre Astier, bâtiment Esclangon

Wang Shuhui

https://lego2023.sciencesconf.org/data/program/abstract_WangShuhui.txt

15:00 - 15:30 (30min)

Coffee break

15:30 - 16:00 (30min)

Maximum entropy models shed light on viral host adaptation

Amphithéâtre Astier, bâtiment Esclangon

Andrea Di Gioacchino

https://lego2023.sciencesconf.org/data/program/abstract_Gioacchino_.txt

16:30 - 17:00 (30min)

Machine learning prediction of genetic variant pleiotropy to characterize the human genetic architecture

Amphithéâtre Astier, bâtiment Esclangon

Martin Tournaire

https://lego2023.sciencesconf.org/data/program/abstract_Tournaire.txt

Planning